Resource
| Id | DNase-seq/ENCSR006IMH |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR006IMH [biosample_summary="Homo sapiens stomach tissue female adult (53 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (53 years) output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR006IMH | float |
DNase-seq_ENCSR006IMH |
DNase-seq ENCSR006IMH [biosample_summary="Homo sapiens stomach tissue female adult (53 years)"]
|
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[0.0549, 39] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 21225726 | 0.66% | 117231 |
| chr1 | 2075521 | 0.83% | 11435 |
| chr2 | 1802569 | 0.74% | 9948 |
| chr3 | 1109668 | 0.56% | 6120 |
| chr4 | 740884 | 0.39% | 4101 |
| chr5 | 939554 | 0.52% | 5247 |
| chr6 | 996084 | 0.58% | 5576 |
| chr7 | 1049800 | 0.66% | 5855 |
| chr8 | 852301 | 0.59% | 4734 |
| chr9 | 994623 | 0.72% | 5395 |
| chr10 | 1167859 | 0.87% | 6422 |
| chr11 | 1214471 | 0.90% | 6691 |
| chr12 | 882254 | 0.66% | 4908 |
| chr13 | 445809 | 0.39% | 2474 |
| chr14 | 710445 | 0.66% | 3935 |
| chr15 | 763450 | 0.75% | 4291 |
| chr16 | 796174 | 0.88% | 4425 |
| chr17 | 1158024 | 1.39% | 6337 |
| chr18 | 378750 | 0.47% | 2122 |
| chr19 | 1013684 | 1.73% | 5470 |
| chr20 | 661020 | 1.03% | 3673 |
| chr21 | 313308 | 0.67% | 1680 |
| chr22 | 711656 | 1.40% | 3879 |
| chrX | 447000 | 0.29% | 2506 |
| chrY | 818 | <0.01% | 7 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 117231 | 2 | 920 | 181.06 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF731YGM.bed.gz | 1.25 MB | f6127b496a7f6ae5640162123ecde773 |
| ENCFF731YGM.tabix.bed.gz | 1.13 MB | 4fc552ad4b46beb93fff74a6d4365bd5 |
| ENCFF731YGM.tabix.bed.gz.tbi | 362.17 KB | d006262de888fd2b019b283bbe8afc25 |
| genomic_resource.yaml | 1.21 KB | 407607278cd602dc1d29e0f13ce32efd |
| statistics/ |
