| Id: | DNase-seq/ENCSR000EQG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EQG [biosample_summary="Homo sapiens T-helper 2 cell"] |
| Description: |
status: released biological_replicates: Rep 2 summary: output_type: peaks audit_error: Alignment file {ENCFF272GJL|/files/ENCFF272GJL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 18880967 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EQG | float |
DNase-seq_ENCSR000EQG |
DNase-seq ENCSR000EQG [biosample_summary="Homo sapiens T-helper 2 cell"]
|
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[0.0317, 43.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF864GBH.bed.gz | 1.18 MB | 7409d394711c647844d5fe2389c47cf7 |
| ENCFF864GBH.bed.gz.dvc | 101.0 B | 5eae679f58793313f87a1200517b2f74 |
| ENCFF864GBH.tabix.bed.gz | 1.08 MB | 717974d1b982c36907de4458e0665c49 |
| ENCFF864GBH.tabix.bed.gz.dvc | 107.0 B | ceef964ba7ebfed04b9efb60ec7c42ea |
| ENCFF864GBH.tabix.bed.gz.tbi | 397.09 KB | 7a9e6aaa4c15f1c0a2b73c8bc9c19c8a |
| ENCFF864GBH.tabix.bed.gz.tbi.dvc | 110.0 B | a82c7ac4f15fbca98ec88c0d9eadbdb2 |
| genomic_resource.yaml | 1.87 KB | 6445f14319757a10af130b04ba8a1a05 |
| genomic_resource_original.yaml | 1.79 KB | 0a9607b131454916802440f637846b8f |
| statistics/ |