| Id: | DNase-seq/ENCSR000EPV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EPV [biosample_summary="Homo sapiens RPMI7951"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF092WUL|/files/ENCFF092WUL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 40098391 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EPV | float |
DNase-seq_ENCSR000EPV |
DNase-seq ENCSR000EPV [biosample_summary="Homo sapiens RPMI7951"]
|
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[0.019, 68.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF270QRU.bed.gz | 2.54 MB | a7379b8e7d3e1c687b6cf427cc8f434d |
| ENCFF270QRU.bed.gz.dvc | 101.0 B | 9148fc33ec467ac0b80167baf02c46c7 |
| ENCFF270QRU.tabix.bed.gz | 2.31 MB | a323ec00d3795f14af8e4526d0ff470b |
| ENCFF270QRU.tabix.bed.gz.dvc | 107.0 B | f883f02f780cd01cb45ccdadfd6bfdbd |
| ENCFF270QRU.tabix.bed.gz.tbi | 669.0 KB | b6f979cb83eb5fc0592ad6b7b6e81a1d |
| ENCFF270QRU.tabix.bed.gz.tbi.dvc | 110.0 B | a649aaeeb5a4e5ea27d32dda842db20d |
| genomic_resource.yaml | 1.71 KB | 52a57bbbd90ecdc9f2ed136236813bba |
| genomic_resource_original.yaml | 1.63 KB | b80938c951c93e41bda8f8d6a411e404 |
| statistics/ |