DNase-seq_ENCSR000EPL
DNase-seq ENCSR000EPL [biosample_summary="Homo sapiens NB4"]
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| Id: | DNase-seq/ENCSR000EPL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EPL [biosample_summary="Homo sapiens NB4"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF885QIE|/files/ENCFF885QIE/} processed by DNase-seq ENCODE4 v3.0.0 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30005629 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EPL | float |
DNase-seq_ENCSR000EPL |
DNase-seq ENCSR000EPL [biosample_summary="Homo sapiens NB4"]
|
|
[0.0207, 89.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF218WIP.bed.gz | 2.19 MB | bd1bc7878f1d778bf1f9693555c9accb |
| ENCFF218WIP.bed.gz.dvc | 101.0 B | 5abf9b247f262f21ac1d46f75c9d48a1 |
| ENCFF218WIP.tabix.bed.gz | 2.0 MB | a19c905c7073e8a3119093687bcdd6c3 |
| ENCFF218WIP.tabix.bed.gz.dvc | 107.0 B | c37e0372e43e9f5fbc57d2b234170abc |
| ENCFF218WIP.tabix.bed.gz.tbi | 617.83 KB | 77ee4974a618ca162fadfd09ea9750cc |
| ENCFF218WIP.tabix.bed.gz.tbi.dvc | 110.0 B | 3daee3edeeed700f6557dfb2c1ab410f |
| genomic_resource.yaml | 1.68 KB | 972765944729847f54de64ea7006f99d |
| genomic_resource_original.yaml | 1.62 KB | fd05c4a43e2ee5667c32c4ad7abba28d |
| statistics/ |