| Id: | DNase-seq/ENCSR000EPE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EPE [biosample_summary="Homo sapiens LHCN-M2"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF486ULM|/files/ENCFF486ULM/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 38228977 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EPE | float |
DNase-seq_ENCSR000EPE |
DNase-seq ENCSR000EPE [biosample_summary="Homo sapiens LHCN-M2"]
|
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[0.0345, 37.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF836HEK.bed.gz | 2.45 MB | 360a2912ac6e12ac170377257a8e7b8c |
| ENCFF836HEK.bed.gz.dvc | 101.0 B | 8fd8abaea1842a71980c1a3e67e9cdc6 |
| ENCFF836HEK.tabix.bed.gz | 2.23 MB | bce3c4332e3339201e93146e8b32fb67 |
| ENCFF836HEK.tabix.bed.gz.dvc | 107.0 B | 3186e04efcca8a576975c03cd4723b45 |
| ENCFF836HEK.tabix.bed.gz.tbi | 682.53 KB | d9475a4247200abdedb52ff5a459a319 |
| ENCFF836HEK.tabix.bed.gz.tbi.dvc | 110.0 B | 9dd70016e81347299d64fe3edd840643 |
| genomic_resource.yaml | 1.7 KB | bc5c035a0e739306e34282a8b0b969a8 |
| genomic_resource_original.yaml | 1.63 KB | a249a9e565c5c1033ddd732c7a180207 |
| statistics/ |