DNase-seq_ENCSR000EOB
DNase-seq ENCSR000EOB [biosample_summary="Homo sapiens dermis microvascular lymphatic vessel endothelial cell male"]
×
| Id: | DNase-seq/ENCSR000EOB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EOB [biosample_summary="Homo sapiens dermis microvascular lymphatic vessel endothelial cell male"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male output_type: peaks audit_warning: Alignment file {ENCFF034MTW|/files/ENCFF034MTW/} processed by DNase-seq ENCODE4 v3.0.0 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 42348464 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EOB | float |
DNase-seq_ENCSR000EOB |
DNase-seq ENCSR000EOB [biosample_summary="Homo sapiens dermis microvascular lymphatic vessel endothelial cell male"]
|
|
[0.0348, 44.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF809MYW.bed.gz | 2.03 MB | a7599caa9a29e0b55841e44acac42153 |
| ENCFF809MYW.bed.gz.dvc | 101.0 B | 5b9d1fcf211921111efe512209cb106f |
| ENCFF809MYW.tabix.bed.gz | 1.86 MB | 3274b3b2510f1f2d0b5f6e1809e6768a |
| ENCFF809MYW.tabix.bed.gz.dvc | 107.0 B | c1efb1e032614b4367fe9a061c43df6b |
| ENCFF809MYW.tabix.bed.gz.tbi | 555.28 KB | 454b98659396678f7146a7ffd2ed75d2 |
| ENCFF809MYW.tabix.bed.gz.tbi.dvc | 110.0 B | 449059bc9d2a5adbc42d8d0bf05c8436 |
| genomic_resource.yaml | 1.85 KB | 19f9eae97dbaece2a68cd69dcb9d473d |
| genomic_resource_original.yaml | 1.73 KB | 1a22762a411f66d74fa40bdabf770ce0 |
| statistics/ |