Resource

Id DNase-seq/ENCSR000ENZcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000ENZ [biosample_summary="Homo sapiens dermis blood vessel endothelial cell male newborn"]
Description
Labels
  • accession: ENCSR000ENZ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_2000010/
  • biosample_summary: Homo sapiens dermis blood vessel endothelial cell male newborn
  • date_created: 2013-12-12T07:09:05.617884+00:00
  • date_released: 2010-12-16
  • doi: 10.17989/ENCSR000ENZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: male newborn
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000ENZ float

DNase-seq_ENCSR000ENZ

DNase-seq ENCSR000ENZ [biosample_summary="Homo sapiens dermis blood vessel endothelial cell male newborn"]
HISTOGRAM FOR DNase-seq_ENCSR000ENZ [0.0322, 28.9]
n
39,200,964
mean
1.93
sd
2.91

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 392009641.22% 201111
chr1 3624999 1.46% 18541
chr2 3136865 1.30% 16081
chr3 2622931 1.32% 13429
chr4 1868809 0.98% 9685
chr5 2151215 1.18% 11009
chr6 2445250 1.43% 12477
chr7 1985487 1.25% 10269
chr8 1738659 1.20% 8889
chr9 1692459 1.22% 8702
chr10 1866363 1.39% 9555
chr11 1926960 1.43% 9879
chr12 2002913 1.50% 10268
chr13 1046070 0.91% 5395
chr14 1234549 1.15% 6342
chr15 1353707 1.33% 6870
chr16 1216379 1.35% 6256
chr17 1692872 2.03% 8652
chr18 863804 1.07% 4443
chr19 1318166 2.25% 6737
chr20 1061839 1.65% 5430
chr21 426887 0.91% 2185
chr22 718425 1.41% 3712
chrX 1162843 0.75% 6077
chrY 42513 0.07% 228
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 201111 1 1220 194.92 180
global segment-length histogram

Files

Filename Size md5
ENCFF174OWC.bed.gz 2.17 MB 987509594351e5278c4563ec7bb81dba
ENCFF174OWC.tabix.bed.gz 2.0 MB 571617b71ff0f754874b84eac80249d3
ENCFF174OWC.tabix.bed.gz.tbi 564.59 KB 7e0b840267065786865877974df1c2a6
genomic_resource.yaml 1.22 KB ae87b9471d190cf149065f4cc3dc4f59
statistics/