DNase-seq_ENCSR000ENW
DNase-seq ENCSR000ENW [biosample_summary="Homo sapiens fibroblast of mammary gland female"]
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| Id: | DNase-seq/ENCSR000ENW |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000ENW [biosample_summary="Homo sapiens fibroblast of mammary gland female"] |
| Description: |
status: released biological_replicates: Rep 2 summary: female output_type: peaks audit_warning: Alignment file {ENCFF762IIO|/files/ENCFF762IIO/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 26870414 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000ENW | float |
DNase-seq_ENCSR000ENW |
DNase-seq ENCSR000ENW [biosample_summary="Homo sapiens fibroblast of mammary gland female"]
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[0.0302, 52.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF032AZY.bed.gz | 2.92 MB | c8f8e8e08971d848a8dd2283a257662d |
| ENCFF032AZY.bed.gz.dvc | 101.0 B | 3c78e9f12f4407f95f1638c9c14fd663 |
| ENCFF032AZY.tabix.bed.gz | 2.66 MB | cb12e0805fb81ba4ea5c6d27862234b5 |
| ENCFF032AZY.tabix.bed.gz.dvc | 107.0 B | a4e9b736b6ec5e62e02a8597a0dee7f4 |
| ENCFF032AZY.tabix.bed.gz.tbi | 723.53 KB | 9c05eed228ef3bb8045b39ea332f0e0e |
| ENCFF032AZY.tabix.bed.gz.tbi.dvc | 110.0 B | 7ac1ff9dcd0dccc6ab0312ac7637b9f5 |
| genomic_resource.yaml | 1.78 KB | 344b7e946efd6203717c66997a98246e |
| genomic_resource_original.yaml | 1.69 KB | 90a441ebb316073441711584cf4f53d2 |
| statistics/ |