DNase-seq_ENCSR000ENN
DNase-seq ENCSR000ENN [biosample_summary="Homo sapiens epithelial cell of esophagus"]
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| Id: | DNase-seq/ENCSR000ENN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000ENN [biosample_summary="Homo sapiens epithelial cell of esophagus"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF072SED|/files/ENCFF072SED/} processed by DNase-seq ENCODE4 v3.0.0 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 25580216 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000ENN | float |
DNase-seq_ENCSR000ENN |
DNase-seq ENCSR000ENN [biosample_summary="Homo sapiens epithelial cell of esophagus"]
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[0.0273, 20.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF722AWL.bed.gz | 3.19 MB | 430be9c4ba4d28140d1c61df5678734a |
| ENCFF722AWL.bed.gz.dvc | 101.0 B | 92c4e1d8b3cbb1b58f806aa7773a3b04 |
| ENCFF722AWL.tabix.bed.gz | 2.91 MB | 523e37788a163c880551748bb00851a1 |
| ENCFF722AWL.tabix.bed.gz.dvc | 107.0 B | 197f0dcf15c9472fe5f6ee771cf25c44 |
| ENCFF722AWL.tabix.bed.gz.tbi | 803.54 KB | 93e8a3d99c1ed762b33ec8fc44cff410 |
| ENCFF722AWL.tabix.bed.gz.tbi.dvc | 110.0 B | 9ebd45f8ecee0f5460480a5d5d91babf |
| genomic_resource.yaml | 1.76 KB | cd53c58238de079a89e8d3449b16c33e |
| genomic_resource_original.yaml | 1.67 KB | abb226bb500c6c8e767934ba76a653cf |
| statistics/ |