| Id: | DNase-seq/ENCSR000ENL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000ENL [biosample_summary="Homo sapiens choroid plexus epithelial cell"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF964EYE|/files/ENCFF964EYE/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 26653868 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000ENL | float |
DNase-seq_ENCSR000ENL |
DNase-seq ENCSR000ENL [biosample_summary="Homo sapiens choroid plexus epithelial cell"]
|
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[0.0297, 47.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF467ANF.bed.gz | 3.03 MB | bf072c6e26e582a19943d39443007df2 |
| ENCFF467ANF.bed.gz.dvc | 101.0 B | dfc4cc4948aef5499ec797a26751bfed |
| ENCFF467ANF.tabix.bed.gz | 2.76 MB | 46ee64eabab7cd6ee7d885493e8c7a83 |
| ENCFF467ANF.tabix.bed.gz.dvc | 107.0 B | bd8861987f56c985f606c007cf42189d |
| ENCFF467ANF.tabix.bed.gz.tbi | 752.46 KB | e5e7e536759f76134a5fa1e753c9ea9d |
| ENCFF467ANF.tabix.bed.gz.tbi.dvc | 110.0 B | d334334e7d3d736da41d4d25afeefdd0 |
| genomic_resource.yaml | 1.77 KB | 6f966b542f1f010d7305ceead8d2eace |
| genomic_resource_original.yaml | 1.68 KB | 8155c7ae12e52f6dc399c87b657a0108 |
| statistics/ |