DNase-seq_ENCSR000EMZ
DNase-seq ENCSR000EMZ [biosample_summary="Homo sapiens H7"]
×
| Id: | DNase-seq/ENCSR000EMZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EMZ [biosample_summary="Homo sapiens H7"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF540XCT|/files/ENCFF540XCT/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 22009685 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EMZ | float |
DNase-seq_ENCSR000EMZ |
DNase-seq ENCSR000EMZ [biosample_summary="Homo sapiens H7"]
|
|
[0.0334, 31.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF128SDV.bed.gz | 3.37 MB | 1155b4f97974895f75326e62f4d08b6d |
| ENCFF128SDV.bed.gz.dvc | 101.0 B | 709ac0994b95a06d019104f1106bb827 |
| ENCFF128SDV.tabix.bed.gz | 3.06 MB | b35e763e4e6ab8acdc29c65478d64e95 |
| ENCFF128SDV.tabix.bed.gz.dvc | 107.0 B | 16400ae5cf81d5d3201470a0861e39fb |
| ENCFF128SDV.tabix.bed.gz.tbi | 868.95 KB | ef767c9ea9c10f8e281fa3461dc7e824 |
| ENCFF128SDV.tabix.bed.gz.tbi.dvc | 110.0 B | 56b53f9ad31fa24878eb9264dff85584 |
| genomic_resource.yaml | 1.69 KB | c344102d19dd9164849d2bbbca259f16 |
| genomic_resource_original.yaml | 1.62 KB | a86025978f5c09b0e7fc61f8b2d2fdad |
| statistics/ |