Resource
| Id | DNase-seq/ENCSR000EMR |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR000EMR [biosample_summary="Homo sapiens GM12864"] |
| Description |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_internal_action: Archived analysis {ENCAN836SCI|/analyses/ENCAN836SCI/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR000EMR | float |
DNase-seq_ENCSR000EMR |
DNase-seq ENCSR000EMR [biosample_summary="Homo sapiens GM12864"]
|
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[2, 3.42e+04] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 10656957 | 0.33% | 70940 |
| chr1 | 1022097 | 0.41% | 6810 |
| chr2 | 847050 | 0.35% | 5639 |
| chr3 | 684831 | 0.35% | 4559 |
| chr4 | 499825 | 0.26% | 3329 |
| chr5 | 570900 | 0.31% | 3798 |
| chr6 | 679924 | 0.40% | 4528 |
| chr7 | 526650 | 0.33% | 3505 |
| chr8 | 491700 | 0.34% | 3267 |
| chr9 | 417687 | 0.30% | 2778 |
| chr10 | 500550 | 0.37% | 3330 |
| chr11 | 522532 | 0.39% | 3480 |
| chr12 | 542100 | 0.41% | 3609 |
| chr13 | 263395 | 0.23% | 1750 |
| chr14 | 349570 | 0.33% | 2328 |
| chr15 | 346580 | 0.34% | 2311 |
| chr16 | 364335 | 0.40% | 2427 |
| chr17 | 480984 | 0.58% | 3202 |
| chr18 | 216534 | 0.27% | 1439 |
| chr19 | 429750 | 0.73% | 2862 |
| chr20 | 268650 | 0.42% | 1789 |
| chr21 | 118463 | 0.25% | 789 |
| chr22 | 210300 | 0.41% | 1398 |
| chrX | 283800 | 0.18% | 1889 |
| chrY | 18750 | 0.03% | 124 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 70940 | 30 | 300 | 150.22 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF355GZH.bed.gz | 693.23 KB | 5bbd7eeda9c985bfedc2563dad11ba9f |
| ENCFF355GZH.tabix.bed.gz | 596.06 KB | ce78104d191511d8775987d6f7ead8ac |
| ENCFF355GZH.tabix.bed.gz.tbi | 360.55 KB | 6034e457c22a2ecb1fc47dae1f908b8f |
| genomic_resource.yaml | 1.26 KB | 596a41c6aff5c900ef9161b54250a3d5 |
| statistics/ |
