Resource

Id	DNase-seq/ENCSR000EMQcontent_copy
Type	position_score
Version	0
Summary	DNase-seq ENCSR000EMQ [biosample_summary="Homo sapiens GM06990"]
Description
Labels	accession: ENCSR000EMQ assay_term_name: DNase-seq biosample_ontology: /biosample-types/cell_line_EFO_0002783/ biosample_summary: Homo sapiens GM06990 date_created: 2014-01-17T20:40:23.192870+00:00 date_released: 2011-04-07 doi: 10.17989/ENCSR000EMQ perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: isogenic simple_biosample_summary: status: released submitter_comment: Fastq file ENCFF001CTW contains reads of mixed lengths. Read lengths followed by respective number of reads: (28, 20892185), (36, 50463143)

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
DNase-seq_ENCSR000EMQ	float	DNase-seq_ENCSR000EMQ	DNase-seq ENCSR000EMQ [biosample_summary="Homo sapiens GM06990"]		[0.0665, 97.7]	n 17,116,130 mean 4.04 sd 7.59

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	17116130	0.53%	82191
chr1	1623341	0.65%	7693
chr2	1270509	0.52%	6189
chr3	1025037	0.52%	5069
chr4	745994	0.39%	3715
chr5	882085	0.49%	4340
chr6	1079327	0.63%	5160
chr7	815650	0.51%	3971
chr8	747259	0.51%	3665
chr9	722449	0.52%	3488
chr10	781892	0.58%	3783
chr11	829864	0.61%	3975
chr12	879083	0.66%	4199
chr13	363262	0.32%	1799
chr14	576130	0.54%	2716
chr15	546278	0.54%	2665
chr16	658770	0.73%	3077
chr17	884875	1.06%	4095
chr18	325167	0.40%	1602
chr19	855565	1.46%	3811
chr20	438570	0.68%	2110
chr21	175594	0.38%	854
chr22	389259	0.77%	1780
chrX	499648	0.32%	2431
chrY	522	<0.01%	4
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	82191	1	1100	208.25	200