Resource

Id	DNase-seq/ENCSR000EMIcontent_copy
Type	position_score
Version	0
Summary	DNase-seq ENCSR000EMI [biosample_summary="Homo sapiens Caco-2"]
Description
Labels	accession: ENCSR000EMI assay_term_name: DNase-seq biosample_ontology: /biosample-types/cell_line_EFO_0001099/ biosample_summary: Homo sapiens Caco-2 date_created: 2013-09-13T16:00:55.211108-08:00 date_released: 2010-12-16 doi: 10.17989/ENCSR000EMI perturbed: False reference_genome: hg38/genomes/GRCh38-hg38 replication_type: isogenic simple_biosample_summary: status: released submitter_comment: Fastq file ENCFF001CQX contains reads of mixed lengths. Read lengths followed by respective number of reads: (28, 25875368), (36, 41473868)

Scores (1)

ID	Type	Default annotation	Description	Histogram	Range	Summary
DNase-seq_ENCSR000EMI	float	DNase-seq_ENCSR000EMI	DNase-seq ENCSR000EMI [biosample_summary="Homo sapiens Caco-2"]		[0.265, 272]	n 6,137,379 mean 12.7 sd 18.2

n counts base pairs; sd is the population standard deviation.

Chromosome	Covered positions	Covered %	Segments
all chromosomes	6137379	0.19%	30102
chr1	557723	0.22%	2723
chr2	450323	0.19%	2217
chr3	351853	0.18%	1723
chr4	235838	0.12%	1172
chr5	289379	0.16%	1436
chr6	333641	0.20%	1662
chr7	298172	0.19%	1466
chr8	219962	0.15%	1090
chr9	219153	0.16%	1081
chr10	297299	0.22%	1487
chr11	368948	0.27%	1796
chr12	332861	0.25%	1633
chr13	141564	0.12%	716
chr14	196285	0.18%	952
chr15	189546	0.19%	926
chr16	260210	0.29%	1256
chr17	343497	0.41%	1664
chr18	87198	0.11%	432
chr19	392806	0.67%	1835
chr20	228224	0.35%	1139
chr21	61497	0.13%	311
chr22	129019	0.25%	635
chrX	152184	0.10%	748
chrY	197	<0.01%	2
3342 contigs with no values (129077085 bp)	0	0.00%	0

	segments	min	max	mean	median
segments	30102	4	760	203.89	220