Resource
| Id | DNase-seq/ENCSR000EMH |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR000EMH [biosample_summary="Homo sapiens stromal cell of bone marrow male"] |
| Description |
status: released biological_replicates: Rep 1 summary: male output_type: peaks audit_internal_action: Archived analysis {ENCAN511ITH|/analyses/ENCAN511ITH/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR000EMH | float |
DNase-seq_ENCSR000EMH |
DNase-seq ENCSR000EMH [biosample_summary="Homo sapiens stromal cell of bone marrow male"]
|
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[2, 2.53e+03] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 25370634 | 0.79% | 169002 |
| chr1 | 2322414 | 0.93% | 15473 |
| chr2 | 2151198 | 0.89% | 14321 |
| chr3 | 1772381 | 0.89% | 11807 |
| chr4 | 1384662 | 0.73% | 9224 |
| chr5 | 1531584 | 0.84% | 10203 |
| chr6 | 1605279 | 0.94% | 10695 |
| chr7 | 1309780 | 0.82% | 8722 |
| chr8 | 1230088 | 0.85% | 8196 |
| chr9 | 1114050 | 0.80% | 7422 |
| chr10 | 1223676 | 0.91% | 8150 |
| chr11 | 1246526 | 0.92% | 8305 |
| chr12 | 1270800 | 0.95% | 8467 |
| chr13 | 695080 | 0.61% | 4632 |
| chr14 | 781568 | 0.73% | 5206 |
| chr15 | 813805 | 0.80% | 5421 |
| chr16 | 724022 | 0.80% | 4821 |
| chr17 | 932957 | 1.12% | 6215 |
| chr18 | 569550 | 0.71% | 3794 |
| chr19 | 648608 | 1.11% | 4325 |
| chr20 | 621550 | 0.96% | 4140 |
| chr21 | 296550 | 0.63% | 1975 |
| chr22 | 379756 | 0.75% | 2529 |
| chrX | 720750 | 0.46% | 4799 |
| chrY | 24000 | 0.04% | 160 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 169002 | 8 | 300 | 150.12 | 150 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF254WCU.bed.gz | 1.6 MB | 4d8cdfa5b7cdfeea002f78fe527b5ead |
| ENCFF254WCU.tabix.bed.gz | 1.38 MB | ee06abb2e1fb3d9521c8114155ab96ba |
| ENCFF254WCU.tabix.bed.gz.tbi | 636.36 KB | 8dfcf42db58192c7a8e2b67ef4afbb2b |
| genomic_resource.yaml | 1.33 KB | e2b73ef505ad7afd06512ca71377ab14 |
| statistics/ |
