| Id: | DNase-seq/ENCSR000EMG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EMG [biosample_summary="Homo sapiens HS-5"] |
| Description: |
status: released biological_replicates: Rep 1 summary: output_type: peaks audit_warning: Alignment file {ENCFF143UAJ|/files/ENCFF143UAJ/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39576336 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EMG | float |
DNase-seq_ENCSR000EMG |
DNase-seq ENCSR000EMG [biosample_summary="Homo sapiens HS-5"]
|
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[0.152, 49.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF791TKP.bed.gz | 892.43 KB | e7f17b37b16e57d6a0ae9e1e1c4d5d20 |
| ENCFF791TKP.bed.gz.dvc | 100.0 B | 413f06bc9f90824228d2a5d9792008c8 |
| ENCFF791TKP.tabix.bed.gz | 801.39 KB | 51643c71bf995aa1edfd3b20518fbaa7 |
| ENCFF791TKP.tabix.bed.gz.dvc | 106.0 B | 841f025435e3009d47111269b43603a3 |
| ENCFF791TKP.tabix.bed.gz.tbi | 430.65 KB | 803e7c8f54fa18b2ba93e1fe58e815ca |
| ENCFF791TKP.tabix.bed.gz.tbi.dvc | 110.0 B | 86661d99b7e16d5244f51d19e8e6de62 |
| genomic_resource.yaml | 1.7 KB | 23b090dafa503e9227a56323dad55dc6 |
| genomic_resource_original.yaml | 1.63 KB | 8eca02e30682df2c4959fdae0e2e093b |
| statistics/ |