| Id: | DNase-seq/ENCSR000EMB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000EMB [biosample_summary="Homo sapiens AG10803"] |
| Description: |
status: released biological_replicates: Rep 2 summary: output_type: peaks audit_warning: Alignment file {ENCFF582OKS|/files/ENCFF582OKS/} processed by DNase-seq ENCODE4 v3.0.0 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 35790675 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000EMB | float |
DNase-seq_ENCSR000EMB |
DNase-seq ENCSR000EMB [biosample_summary="Homo sapiens AG10803"]
|
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[0.0336, 59.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF472VYR.bed.gz | 2.62 MB | 17a6c87d96e58a5246b4658de707b4d8 |
| ENCFF472VYR.bed.gz.dvc | 101.0 B | ff6f0f33b39f1c83fa0c0501fe769a18 |
| ENCFF472VYR.tabix.bed.gz | 2.38 MB | 7a4e591f2ce8f788b6caaaedc640ae81 |
| ENCFF472VYR.tabix.bed.gz.dvc | 107.0 B | fa142383d8d8c500d55b0ae1d0949518 |
| ENCFF472VYR.tabix.bed.gz.tbi | 676.11 KB | 30ec1ad4b96896925c345ad80e4b9369 |
| ENCFF472VYR.tabix.bed.gz.tbi.dvc | 110.0 B | 22f3d89a9ff42ae05f5f711d5540b502 |
| genomic_resource.yaml | 1.7 KB | d467a5c131eb4d54e9add191218d5709 |
| genomic_resource_original.yaml | 1.62 KB | 27df073a7b7017d420825911efd599e9 |
| statistics/ |