DNase-seq_ENCSR000ELE
DNase-seq ENCSR000ELE [biosample_summary="Homo sapiens CD14-positive monocyte female"]
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| Id: | DNase-seq/ENCSR000ELE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR000ELE [biosample_summary="Homo sapiens CD14-positive monocyte female"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female output_type: peaks audit_error: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF806MXQ|/files/ENCFF806MXQ/} processed by DNase-seq ENCODE4 v3.0.0 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.24. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) audit_internal_action: Released analysis {ENCAN099HNN|/analyses/ENCAN099HNN/} has in progress subobject document {47265b5f-917b-4721-b04f-c21091d0b41f|/documents/47265b5f-917b-4721-b04f-c21091d0b41f/} |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR000ELE | float |
DNase-seq_ENCSR000ELE |
DNase-seq ENCSR000ELE [biosample_summary="Homo sapiens CD14-positive monocyte female"]
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[0.0742, 14.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF508FIN.bed.gz | 632.86 KB | c59e3311cbb968a9701fd377afe92599 |
| ENCFF508FIN.bed.gz.dvc | 100.0 B | 14d4b064674e326cf61d608b9d2eb51b |
| ENCFF508FIN.tabix.bed.gz | 576.77 KB | 8b84b58d8f6b04ced14fd6332bc5883d |
| ENCFF508FIN.tabix.bed.gz.dvc | 106.0 B | acee7ead2318030198d859b01e65bd04 |
| ENCFF508FIN.tabix.bed.gz.tbi | 254.68 KB | b39cb1236faa27598d72900adbdaed8b |
| ENCFF508FIN.tabix.bed.gz.tbi.dvc | 110.0 B | 2720fc813962a55e061183eff3407b82 |
| genomic_resource.yaml | 2.17 KB | eb64189db7be8e4c20b97b659b746aa3 |
| genomic_resource_original.yaml | 2.08 KB | 015e130e2e9452d9b25a5a35ade5bad7 |
| statistics/ |