Resource

Id DNase-seq/ENCSR000ELEcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR000ELE [biosample_summary="Homo sapiens CD14-positive monocyte female"]
Description
Labels
  • accession: ENCSR000ELE
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0001054/
  • biosample_summary: Homo sapiens CD14-positive monocyte female
  • date_created: 2013-12-12T07:07:54.827060+00:00
  • date_released: 2012-08-28
  • doi: 10.17989/ENCSR000ELE
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: anisogenic
  • simple_biosample_summary: female
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR000ELE float

DNase-seq_ENCSR000ELE

DNase-seq ENCSR000ELE [biosample_summary="Homo sapiens CD14-positive monocyte female"]
HISTOGRAM FOR DNase-seq_ENCSR000ELE [0.0742, 14.9]
n
10,181,201
mean
1.66
sd
1.45

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 101812010.32% 58403
chr1 1000801 0.40% 5725
chr2 731853 0.30% 4266
chr3 604278 0.30% 3468
chr4 387588 0.20% 2259
chr5 442755 0.24% 2595
chr6 555416 0.33% 3244
chr7 486121 0.31% 2788
chr8 438095 0.30% 2493
chr9 443987 0.32% 2542
chr10 467450 0.35% 2707
chr11 566284 0.42% 3231
chr12 534851 0.40% 3062
chr13 190992 0.17% 1100
chr14 345548 0.32% 1952
chr15 329131 0.32% 1885
chr16 376138 0.42% 2141
chr17 575273 0.69% 3283
chr18 173250 0.22% 998
chr19 622369 1.06% 3444
chr20 301257 0.47% 1737
chr21 122782 0.26% 722
chr22 255043 0.50% 1427
chrX 229939 0.15% 1334
3343 contigs with no values (186304500 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 58403 1 780 174.33 163
global segment-length histogram

Files

Filename Size md5
ENCFF508FIN.bed.gz 632.86 KB c59e3311cbb968a9701fd377afe92599
ENCFF508FIN.tabix.bed.gz 576.77 KB 8b84b58d8f6b04ced14fd6332bc5883d
ENCFF508FIN.tabix.bed.gz.tbi 254.68 KB b39cb1236faa27598d72900adbdaed8b
genomic_resource.yaml 2.17 KB eb64189db7be8e4c20b97b659b746aa3
statistics/