Resource
| Id | ATAC-seq/ENCSR952SPO |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | ATAC-seq ENCSR952SPO [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)"] |
| Description |
status: revoked biological_replicates: Rep 1 summary: female child (16 years) output_type: pseudoreplicated peaks audit_internal_action: Revoked analysis {ENCAN679XAX|/analyses/ENCAN679XAX/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_internal_action: Revoked analysis {ENCAN679XAX|/analyses/ENCAN679XAX/} has in progress subobject document {421e2bdd-39c0-4bb0-bf30-05e5f02e389a|/documents/421e2bdd-39c0-4bb0-bf30-05e5f02e389a/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| ATAC-seq_ENCSR952SPO | float |
ATAC-seq_ENCSR952SPO |
ATAC-seq ENCSR952SPO [biosample_summary="Homo sapiens right lobe of liver tissue female child (16 years)"]
|
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[1.23, 41.8] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 105528900 | 3.28% | 162248 |
| chr1 | 10051177 | 4.04% | 15300 |
| chr2 | 8565792 | 3.54% | 13297 |
| chr3 | 6898904 | 3.48% | 10854 |
| chr4 | 4843728 | 2.55% | 7685 |
| chr5 | 5527332 | 3.04% | 8744 |
| chr6 | 6241227 | 3.65% | 9651 |
| chr7 | 5513105 | 3.46% | 8489 |
| chr8 | 4646462 | 3.20% | 7275 |
| chr9 | 4569750 | 3.30% | 6935 |
| chr10 | 5356633 | 4.00% | 8261 |
| chr11 | 5314646 | 3.93% | 8080 |
| chr12 | 5269471 | 3.95% | 8117 |
| chr13 | 2596058 | 2.27% | 4031 |
| chr14 | 3348341 | 3.13% | 5122 |
| chr15 | 3423238 | 3.36% | 5283 |
| chr16 | 3719078 | 4.12% | 5512 |
| chr17 | 4651996 | 5.59% | 6898 |
| chr18 | 2372464 | 2.95% | 3702 |
| chr19 | 3400104 | 5.80% | 4874 |
| chr20 | 2684626 | 4.17% | 4165 |
| chr21 | 1357311 | 2.91% | 1982 |
| chr22 | 2210724 | 4.35% | 3226 |
| chrX | 2965590 | 1.90% | 4760 |
| chrY | 1143 | <0.01% | 5 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 162248 | 150 | 4253 | 650.42 | 527 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF921BTJ.bed.gz | 6.74 MB | 1f2228c9c9d94ed6b374345e261efbe6 |
| ENCFF921BTJ.tabix.bed.gz | 1.79 MB | 978bad85db89e69955bbfe1c8152c01f |
| ENCFF921BTJ.tabix.bed.gz.tbi | 505.28 KB | 834e5ed6bd5c397195b7899b79ba2594 |
| genomic_resource.yaml | 1.65 KB | e6850b42c6ec0e062be334c29b4c755d |
| statistics/ |
