Resource

Id ATAC-seq/ENCSR808HWScontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR808HWS [biosample_summary="Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours"]
Description
Labels
  • accession: ENCSR808HWS
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000623/
  • biosample_summary: Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours
  • date_created: 2021-07-14T20:39:45.612543+00:00
  • date_released: 2021-09-09
  • doi: 10.17989/ENCSR808HWS
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: isogenic
  • simple_biosample_summary: female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR808HWS float

ATAC-seq_ENCSR808HWS
ATAC-seq ENCSR808HWS [biosample_summary="Homo sapiens natural killer cell female adult (41 years) treated with 100 ng/mL Interleukin-18 for 72 hours, 100 ng/mL Interleukin-12 subunit beta for 72 hours, 100 ng/mL Interleukin-15 for 72 hours, 100 ng/mL Interleukin-12 subunit alpha for 72 hours"]
 HISTOGRAM FOR ATAC-seq_ENCSR808HWS [1.2, 42.8]
n
56,787,362
mean
6.21
sd
4.82

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 567873621.77% 106929
chr1 5381540 2.16% 9905
chr2 4626345 1.91% 8899
chr3 3372558 1.70% 6440
chr4 2107667 1.11% 4052
chr5 2980888 1.64% 5802
chr6 3225044 1.89% 6040
chr7 2994039 1.88% 5741
chr8 2346418 1.62% 4580
chr9 2341222 1.69% 4448
chr10 3022113 2.26% 5849
chr11 2775967 2.05% 5211
chr12 2577317 1.93% 4818
chr13 1305887 1.14% 2556
chr14 1794616 1.68% 3322
chr15 1983902 1.95% 3773
chr16 2057107 2.28% 3772
chr17 2646309 3.18% 4632
chr18 1255120 1.56% 2489
chr19 2378480 4.06% 4039
chr20 1620176 2.51% 3139
chr21 750121 1.61% 1395
chr22 1282974 2.52% 2307
chrX 1960910 1.26% 3717
chrY 642 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 106929 150 3008 531.08 439
global segment-length histogram

Files

Filename Size md5
ENCFF837LBW.bed.gz 3.84 MB a6984ca34f7ed4c9d06b1f81bb8daa14
ENCFF837LBW.tabix.bed.gz 1.16 MB 08c2d0aa20f66785e74f3732915873b3
ENCFF837LBW.tabix.bed.gz.tbi 458.66 KB f19bee8751e2e52259f34cee3c93dbf5
genomic_resource.yaml 2.41 KB 04bbd1ac51f728db0f0c5dacf1ee50d9
statistics/