Resource

Id ATAC-seq/ENCSR765MXGcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR765MXG [biosample_summary="Homo sapiens body of pancreas tissue male adult (54 years)"]
Description
Labels
  • accession: ENCSR765MXG
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001150/
  • biosample_summary: Homo sapiens body of pancreas tissue male adult (54 years)
  • date_created: 2016-11-01T02:43:23.760629+00:00
  • date_released: 2016-10-31
  • doi: 10.17989/ENCSR765MXG
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR765MXG float

ATAC-seq_ENCSR765MXG
ATAC-seq ENCSR765MXG [biosample_summary="Homo sapiens body of pancreas tissue male adult (54 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR765MXG [1.37, 38.5]
n
53,677,674
mean
6.78
sd
3.3

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 536776741.67% 90627
chr1 5343808 2.15% 8813
chr2 4214240 1.74% 7304
chr3 3220507 1.62% 5629
chr4 2373219 1.25% 4249
chr5 2698833 1.49% 4724
chr6 3127206 1.83% 5263
chr7 2816652 1.77% 4816
chr8 2301882 1.59% 3967
chr9 2321575 1.68% 3901
chr10 2679114 2.00% 4599
chr11 2800468 2.07% 4677
chr12 2570806 1.93% 4297
chr13 1290060 1.13% 2259
chr14 1779588 1.66% 3009
chr15 1840048 1.80% 3076
chr16 1969381 2.18% 3153
chr17 2603544 3.13% 4149
chr18 1072133 1.33% 1908
chr19 2162064 3.69% 3264
chr20 1355773 2.10% 2323
chr21 717585 1.54% 1196
chr22 1140794 2.24% 1857
chrX 1184224 0.76% 2013
chrY 94170 0.16% 181
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 90627 150 3533 592.29 480
global segment-length histogram

Files

Filename Size md5
ENCFF534KVY.bed.gz 3.78 MB 5618eb9ba7d4b5610e9bb3b948e961eb
ENCFF534KVY.tabix.bed.gz 1017.93 KB f86a688129e09150b679329edfc749d3
ENCFF534KVY.tabix.bed.gz.tbi 401.66 KB 2f3839c4c9c087c27c7796f96673805d
genomic_resource.yaml 1.63 KB 6f2be564ce0f381e8bce41e100b38f35
statistics/