| Id: | ATAC-seq/ENCSR694OWY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
ATAC-seq ENCSR694OWY [biosample_summary="Homo sapiens spleen tissue male adult (26 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (26 years) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN913DES|/analyses/ENCAN913DES/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_not_compliant: According to ENCODE4 standards, overlap peaks files in ATAC-seq assays processed by the uniform processing pipeline should have FRiP (fraction of reads in called peak regions) scores > 0.3. FRiP scores 0.2-0.3 are acceptable, and < 0.2 are not compliant. {ENCFF243GGQ|/files/ENCFF243GGQ/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has a FRiP score of 0.13. audit_warning: Transcription Start Site (TSS) enrichment values for alignments to the human genome GRCh38 are concerning when < 5, acceptable between 5 and 7, and ideal when > 7. ENCODE processed file {ENCFF933VBN|/files/ENCFF933VBN/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has a TSS enrichment value of 6.381710600380918. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| ATAC-seq_ENCSR694OWY | float |
ATAC-seq_ENCSR694OWY |
ATAC-seq ENCSR694OWY [biosample_summary="Homo sapiens spleen tissue male adult (26 years)"]
|
![]() |
[1.44, 22.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF243GGQ.bed.gz | 4.59 MB | fe82601941d9e2701a08ce91af195f6c |
| ENCFF243GGQ.bed.gz.dvc | 101.0 B | 9a9235c8e39b3692033d73a8f3afaf35 |
| ENCFF243GGQ.tabix.bed.gz | 1.48 MB | bd6da10821d50f77e32eb13cca1c591b |
| ENCFF243GGQ.tabix.bed.gz.dvc | 107.0 B | a5a9d658389c699b3503d1e4f0e99add |
| ENCFF243GGQ.tabix.bed.gz.tbi | 593.13 KB | df68c50b148813a761b152b08c7fe57e |
| ENCFF243GGQ.tabix.bed.gz.tbi.dvc | 110.0 B | 9c13e3faea176320298e75581bf20779 |
| genomic_resource.yaml | 2.51 KB | c8c8789f13da932b500f58341acdcb00 |
| genomic_resource_original.yaml | 2.42 KB | bdf23a8d1aec1145fcad37f90dbcae45 |
| statistics/ |