Resource
| Id | ATAC-seq/ENCSR685ZMP |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | ATAC-seq ENCSR685ZMP [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)"] |
| Description |
status: revoked biological_replicates: Rep 1 summary: female adult (41 years) output_type: pseudoreplicated peaks audit_internal_action: Revoked analysis {ENCAN558BAS|/analyses/ENCAN558BAS/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_internal_action: Revoked analysis {ENCAN558BAS|/analyses/ENCAN558BAS/} has in progress subobject document {7f1b308a-245e-4e5b-a807-495dc0220646|/documents/7f1b308a-245e-4e5b-a807-495dc0220646/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| ATAC-seq_ENCSR685ZMP | float |
ATAC-seq_ENCSR685ZMP |
ATAC-seq ENCSR685ZMP [biosample_summary="Homo sapiens right lobe of liver tissue female adult (41 years)"]
|
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[1.3, 36.1] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 107926259 | 3.35% | 180865 |
| chr1 | 10254656 | 4.12% | 16961 |
| chr2 | 8725538 | 3.60% | 14872 |
| chr3 | 7102529 | 3.58% | 12233 |
| chr4 | 4879673 | 2.57% | 8600 |
| chr5 | 5774549 | 3.18% | 9987 |
| chr6 | 6480365 | 3.79% | 10907 |
| chr7 | 5576893 | 3.50% | 9377 |
| chr8 | 4849738 | 3.34% | 8365 |
| chr9 | 4681666 | 3.38% | 7816 |
| chr10 | 5426086 | 4.06% | 9111 |
| chr11 | 5352577 | 3.96% | 8856 |
| chr12 | 5352220 | 4.02% | 8964 |
| chr13 | 2746978 | 2.40% | 4646 |
| chr14 | 3423269 | 3.20% | 5710 |
| chr15 | 3565990 | 3.50% | 5889 |
| chr16 | 3725772 | 4.12% | 6009 |
| chr17 | 4661408 | 5.60% | 7355 |
| chr18 | 2416915 | 3.01% | 4152 |
| chr19 | 3458572 | 5.90% | 5217 |
| chr20 | 2786826 | 4.32% | 4650 |
| chr21 | 1395252 | 2.99% | 2244 |
| chr22 | 2226220 | 4.38% | 3506 |
| chrX | 3060538 | 1.96% | 5431 |
| chrY | 2029 | <0.01% | 7 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 180865 | 150 | 4127 | 596.72 | 477 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF933ZJW.bed.gz | 6.96 MB | b22989c595d1f39e1806743d47a935c6 |
| ENCFF933ZJW.tabix.bed.gz | 1.98 MB | 4273f3f38c8aa221b28d33149b15e8e8 |
| ENCFF933ZJW.tabix.bed.gz.tbi | 527.18 KB | 073a9410f79cad18f2dba01e31db60c1 |
| genomic_resource.yaml | 1.65 KB | 0fa4072864418f4af335dfe51f69d1a3 |
| statistics/ |
