ATAC-seq_ENCSR660WSB
ATAC-seq ENCSR660WSB [biosample_summary="Homo sapiens DND-41"]
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| Id: | ATAC-seq/ENCSR660WSB |
| Type: | position_score |
| Version: | 0 |
| Summary: |
ATAC-seq ENCSR660WSB [biosample_summary="Homo sapiens DND-41"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2, Rep 3 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN022AWY|/analyses/ENCAN022AWY/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_not_compliant: Alignment file {ENCFF538YYI|/files/ENCFF538YYI/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has 18838391 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. audit_not_compliant: Alignment file {ENCFF080WSN|/files/ENCFF080WSN/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has 19065448 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. audit_warning: Alignment file {ENCFF626KDS|/files/ENCFF626KDS/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has 21457282 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| ATAC-seq_ENCSR660WSB | float |
ATAC-seq_ENCSR660WSB |
ATAC-seq ENCSR660WSB [biosample_summary="Homo sapiens DND-41"]
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[1.25, 47] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF095ATB.bed.gz | 3.75 MB | 0e6fcf428ada27dbd02cfd216fd9ad3b |
| ENCFF095ATB.bed.gz.dvc | 101.0 B | e362367f31424fcc777a45afd8382976 |
| ENCFF095ATB.tabix.bed.gz | 1.04 MB | c3ac569eef63733760cca73b048b331e |
| ENCFF095ATB.tabix.bed.gz.dvc | 107.0 B | 160e075e8c4cb36990e3acab8be592cc |
| ENCFF095ATB.tabix.bed.gz.tbi | 420.32 KB | a27d529d0cedcfc81ab7dbd830c21695 |
| ENCFF095ATB.tabix.bed.gz.tbi.dvc | 110.0 B | 587e63de224017ab408cffd6c26bf3c4 |
| genomic_resource.yaml | 2.44 KB | 582e319cd14750e25d0dba6dcbb584e2 |
| genomic_resource_original.yaml | 2.37 KB | d71effcb1eedc59e1b5c334da7c53cb4 |
| statistics/ |