Resource

Id ATAC-seq/ENCSR651SOJcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR651SOJ [biosample_summary="Homo sapiens adrenal gland tissue female adult (47 years)"]
Description
Labels
  • accession: ENCSR651SOJ
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue female adult (47 years)
  • date_created: 2019-05-29T06:39:21.080745+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR651SOJ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (47 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR651SOJ float

ATAC-seq_ENCSR651SOJ
ATAC-seq ENCSR651SOJ [biosample_summary="Homo sapiens adrenal gland tissue female adult (47 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR651SOJ [1.28, 41.7]
n
104,175,653
mean
7.39
sd
4.34

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 1041756533.24% 174625
chr1 10160104 4.08% 16741
chr2 8298793 3.43% 14302
chr3 6637057 3.35% 11642
chr4 4288633 2.25% 7786
chr5 5401846 2.98% 9492
chr6 5658384 3.31% 9801
chr7 5360443 3.36% 9153
chr8 4438361 3.06% 7698
chr9 4615973 3.34% 7694
chr10 5210938 3.89% 8880
chr11 5323886 3.94% 8707
chr12 5083292 3.81% 8532
chr13 2422958 2.12% 4304
chr14 3315551 3.10% 5599
chr15 3552437 3.48% 5849
chr16 3735191 4.13% 5847
chr17 5110950 6.14% 7795
chr18 2193039 2.73% 3845
chr19 3948880 6.74% 5594
chr20 2960461 4.59% 4883
chr21 1341023 2.87% 2177
chr22 2398559 4.72% 3612
chrX 2718344 1.74% 4690
chrY 550 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 174625 150 3847 596.57 488
global segment-length histogram

Files

Filename Size md5
ENCFF016ROY.bed.gz 6.51 MB cd95c6afd77a428a555932dae0919301
ENCFF016ROY.tabix.bed.gz 1.89 MB 396c2a1a12ea72741f5bbd08bcd895a6
ENCFF016ROY.tabix.bed.gz.tbi 541.91 KB fe58c05e6f9ed96f5a0f3af03883fefd
genomic_resource.yaml 1.63 KB b0fca356b97685d06ddca9871418d88b
statistics/