Resource

Id ATAC-seq/ENCSR607BTFcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR607BTF [biosample_summary="Homo sapiens right lobe of liver tissue male adult (45 years)"]
Description
Labels
  • accession: ENCSR607BTF
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001114/
  • biosample_summary: Homo sapiens right lobe of liver tissue male adult (45 years)
  • date_created: 2019-06-02T14:10:43.583762+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR607BTF
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (45 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR607BTF float

ATAC-seq_ENCSR607BTF
ATAC-seq ENCSR607BTF [biosample_summary="Homo sapiens right lobe of liver tissue male adult (45 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR607BTF [1.21, 44.6]
n
89,329,381
mean
6.37
sd
3.8

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 893293812.78% 160336
chr1 8515463 3.42% 15111
chr2 7019036 2.90% 12855
chr3 5688271 2.87% 10455
chr4 4001431 2.10% 7462
chr5 4495573 2.48% 8281
chr6 5009981 2.93% 8983
chr7 4707465 2.95% 8451
chr8 3840823 2.65% 7054
chr9 3911557 2.83% 7005
chr10 4524702 3.38% 8187
chr11 4552860 3.37% 8087
chr12 4457351 3.34% 8053
chr13 2204821 1.93% 3958
chr14 2855261 2.67% 5079
chr15 2974018 2.92% 5311
chr16 3312501 3.67% 5705
chr17 4122862 4.95% 7037
chr18 1994067 2.48% 3638
chr19 3191783 5.45% 5275
chr20 2357323 3.66% 4216
chr21 1163325 2.49% 2029
chr22 2038945 4.01% 3523
chrX 2166695 1.39% 4149
chrY 223267 0.39% 432
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 160336 150 4224 557.14 440
global segment-length histogram

Files

Filename Size md5
ENCFF415YNL.bed.gz 6.35 MB 7f866b77a91ff42ddf07b2fdee9aa1df
ENCFF415YNL.tabix.bed.gz 1.76 MB 6766bca8dbe9d9593c3e559820e432cc
ENCFF415YNL.tabix.bed.gz.tbi 498.78 KB d5809c6bf92b60f18e1724c8cd2174c5
genomic_resource.yaml 1.64 KB e056991de6fdba86f16727b9705ba193
statistics/