ATAC-seq_ENCSR563ZNI
ATAC-seq ENCSR563ZNI [biosample_summary="Homo sapiens heart right ventricle tissue male adult (61 years)"]
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| Id: | ATAC-seq/ENCSR563ZNI |
| Type: | position_score |
| Version: | 0 |
| Summary: |
ATAC-seq ENCSR563ZNI [biosample_summary="Homo sapiens heart right ventricle tissue male adult (61 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (61 years) output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN997KUF|/analyses/ENCAN997KUF/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_internal_action: Released analysis {ENCAN997KUF|/analyses/ENCAN997KUF/} has in progress subobject document {df54c1d7-9744-491f-9d23-3c09ef1442c3|/documents/df54c1d7-9744-491f-9d23-3c09ef1442c3/} audit_warning: NRF (Non Redundant Fraction) is equal to the result of the division of the number of reads after duplicates removal by the total number of reads. An NRF value < 0.7 is poor complexity, between 0.7 and 0.9 is moderate complexity, and >= 0.9 high complexity. NRF value > 0.9 is recommended, but > 0.7 is acceptable. ENCODE processed file {ENCFF352HQI|/files/ENCFF352HQI/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline was generated from a library with NRF value of 0.792864. audit_warning: PBC1 (PCR Bottlenecking Coefficient 1, M1/M_distinct) is the ratio of the number of genomic locations where exactly one read maps uniquely (M1) to the number of genomic locations where some reads map (M_distinct). A PBC1 value in the range 0 - 0.5 is severe bottlenecking, 0.5 - 0.8 is moderate bottlenecking, 0.8 - 0.9 is mild bottlenecking, and > 0.9 is no bottlenecking. PBC1 value > 0.9 is recommended, but > 0.7 is acceptable. ENCODE processed file {ENCFF352HQI|/files/ENCFF352HQI/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline was generated from a library with a PBC1 value of 0.88. |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| ATAC-seq_ENCSR563ZNI | float |
ATAC-seq_ENCSR563ZNI |
ATAC-seq ENCSR563ZNI [biosample_summary="Homo sapiens heart right ventricle tissue male adult (61 years)"]
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[1.31, 41.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF012BKZ.bed.gz | 5.73 MB | 31ffb0e0bf7d32bdf75221d8cf47b1cc |
| ENCFF012BKZ.bed.gz.dvc | 101.0 B | 5fed1263ac1ce299ff8f4a9a595e94ad |
| ENCFF012BKZ.tabix.bed.gz | 1.65 MB | 58b0702af616c1cf01dc4818221a9f19 |
| ENCFF012BKZ.tabix.bed.gz.dvc | 107.0 B | 6e5a95150943fa1e3cc0c8530a21c12f |
| ENCFF012BKZ.tabix.bed.gz.tbi | 483.95 KB | 2eeec440811be82e8c61d3314041a170 |
| ENCFF012BKZ.tabix.bed.gz.tbi.dvc | 110.0 B | 3a2e282d2186aaeabbd2799ec6b81a4d |
| genomic_resource.yaml | 2.8 KB | d0f3bc188f07dcc776834facd0576103 |
| genomic_resource_original.yaml | 2.7 KB | 10c004dcd4b10f88eeb74cbffdfde8d4 |
| statistics/ |