Resource

Id: ATAC-seq/ENCSR548SSP
Type: position_score
Version: 0
Summary:
Description:
Labels:
  • reference_genome: hg38/genomes/GRCh38-hg38
  • accession: ENCSR548SSP
  • status: released
  • assay_term_name: ATAC-seq
  • simple_biosample_summary: female adult (47 years)
  • biosample_summary: Homo sapiens mucosa of urinary bladder tissue female adult (47 years)
  • replication_type: unreplicated
  • biosample_ontology: /biosample-types/tissue_UBERON_0001259/
  • perturbed: False
  • doi: 10.17989/ENCSR548SSP
  • date_created: 2019-05-29T09:20:58.166780+00:00
  • date_released: 2022-06-16
  • submitter_comment: Despite lower enrichment scores and peaks, sequence-based predictive models (neural networks) fit to these data reveal useful motifs and motif annotations. Given the value of these rare samples, we release them with an enrichment QC warning indicating that these data likely have lower sensitivity for detecting accessible regulatory elements.

Scores

ID Type Default annotation Description Histogram Range
ATAC-seq_ENCSR548SSP float

ATAC-seq_ENCSR548SSP
ATAC-seq ENCSR548SSP [biosample_summary="Homo sapiens mucosa of urinary bladder tissue female adult (47 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR548SSP [1.4, 26.8]

Files

Filename Size md5
ENCFF037LDD.bed.gz 3.99 MB 6fe21ea2f9f2bc170430ff61549db8e2
ENCFF037LDD.bed.gz.dvc 101.0 B dbefc5a0f455dcab4693a73f957732d2
ENCFF037LDD.tabix.bed.gz 1.19 MB d946bf64522bc782520b5c4f6c3aba08
ENCFF037LDD.tabix.bed.gz.dvc 107.0 B 61eb8ac15400c2e3ce63032bb9c74118
ENCFF037LDD.tabix.bed.gz.tbi 472.48 KB 69761cb6b9c9ae39c14fb76feae03134
ENCFF037LDD.tabix.bed.gz.tbi.dvc 110.0 B 82c6f9f303a73a0548caad74fdc46101
genomic_resource.yaml 2.23 KB b2d5b20c3c2fa5c9f7db8bbdbdcd361e
genomic_resource_original.yaml 2.12 KB a200d6e8f47fd22561c2568a77454655
statistics/