| Id: | ATAC-seq/ENCSR545UJP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
ATAC-seq ENCSR545UJP [biosample_summary="Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days nuclear fraction output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN368HDK|/analyses/ENCAN368HDK/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_warning: NRF (Non Redundant Fraction) is equal to the result of the division of the number of reads after duplicates removal by the total number of reads. An NRF value < 0.7 is poor complexity, between 0.7 and 0.9 is moderate complexity, and >= 0.9 high complexity. NRF value > 0.9 is recommended, but > 0.7 is acceptable. ENCODE processed file {ENCFF112PVN|/files/ENCFF112PVN/} processed by ATAC-seq ENCODE4 v1.10.0 GRCh38 pipeline was generated from a library with NRF value of 0.895784. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| ATAC-seq_ENCSR545UJP | float |
ATAC-seq_ENCSR545UJP |
ATAC-seq ENCSR545UJP [biosample_summary="Homo sapiens activated CD8-positive, alpha-beta T cell nuclear fraction male adult (21 years) treated with anti-CD3 and anti-CD28 coated beads for 7 days, 10 ng/mL Interleukin-2 for 5 days"]
|
 |
[1.29, 39.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF706APW.bed.gz | 3.14 MB | 5c912918d45cba84fe2350dad4f030b4 |
| ENCFF706APW.bed.gz.dvc | 101.0 B | 02f08482106a91d918ac86fff92e5c4d |
| ENCFF706APW.tabix.bed.gz | 800.39 KB | 065ec20d6721ff6c65b3e6642b45f865 |
| ENCFF706APW.tabix.bed.gz.dvc | 106.0 B | e9c5fba6784e45eca0751731e8e222b7 |
| ENCFF706APW.tabix.bed.gz.tbi | 313.28 KB | 5be25dfca97cef6f22ea1a909b53cea3 |
| ENCFF706APW.tabix.bed.gz.tbi.dvc | 110.0 B | 85c625c8ef72234f5b74c2b06f6398cf |
| genomic_resource.yaml | 2.56 KB | f21b25967179e8b48024b2a3a77925a3 |
| genomic_resource_original.yaml | 2.34 KB | ac58bc87ef0b98a7f8983216074b2038 |
| statistics/ |