Resource
| Id | ATAC-seq/ENCSR515CDW |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | ATAC-seq ENCSR515CDW [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)"] |
| Description |
status: revoked biological_replicates: Rep 1 summary: female adult (53 years) output_type: pseudoreplicated peaks audit_internal_action: Revoked analysis {ENCAN685ZFO|/analyses/ENCAN685ZFO/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_internal_action: Revoked analysis {ENCAN685ZFO|/analyses/ENCAN685ZFO/} has in progress subobject document {7c50c00f-d93f-45eb-893d-f7469740e521|/documents/7c50c00f-d93f-45eb-893d-f7469740e521/} |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| ATAC-seq_ENCSR515CDW | float |
ATAC-seq_ENCSR515CDW |
ATAC-seq ENCSR515CDW [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)"]
|
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[1.94, 16] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 8999310 | 0.28% | 22660 |
| chr1 | 858939 | 0.35% | 2135 |
| chr2 | 686438 | 0.28% | 1745 |
| chr3 | 577634 | 0.29% | 1452 |
| chr4 | 476414 | 0.25% | 1235 |
| chr5 | 482219 | 0.27% | 1244 |
| chr6 | 497224 | 0.29% | 1237 |
| chr7 | 475316 | 0.30% | 1184 |
| chr8 | 423258 | 0.29% | 1100 |
| chr9 | 410678 | 0.30% | 1023 |
| chr10 | 413956 | 0.31% | 1070 |
| chr11 | 444234 | 0.33% | 1086 |
| chr12 | 430957 | 0.32% | 1079 |
| chr13 | 230092 | 0.20% | 598 |
| chr14 | 292254 | 0.27% | 712 |
| chr15 | 247525 | 0.24% | 637 |
| chr16 | 323553 | 0.36% | 802 |
| chr17 | 376154 | 0.45% | 921 |
| chr18 | 184435 | 0.23% | 472 |
| chr19 | 410074 | 0.70% | 949 |
| chr20 | 211338 | 0.33% | 559 |
| chr21 | 119057 | 0.25% | 287 |
| chr22 | 160580 | 0.32% | 410 |
| chrX | 266234 | 0.17% | 720 |
| chrY | 747 | <0.01% | 3 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 22660 | 150 | 1925 | 397.15 | 348 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF197KIH.bed.gz | 545.56 KB | 43b96b5365d72acd33c2a775b891d948 |
| ENCFF197KIH.tabix.bed.gz | 239.97 KB | b2d5e9c1aa72029599aff121bd1a00bf |
| ENCFF197KIH.tabix.bed.gz.tbi | 175.26 KB | 2863da4bca6fde66cc2d5a39b4de66ed |
| genomic_resource.yaml | 1.64 KB | 10c21637c5e35e60079fe4847f1ec7d2 |
| statistics/ |
