| Id: | ATAC-seq/ENCSR382LBS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
ATAC-seq ENCSR382LBS [biosample_summary="Homo sapiens NCI-H929"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2, Rep 3 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN245MNX|/analyses/ENCAN245MNX/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_not_compliant: Alignment file {ENCFF531SQN|/files/ENCFF531SQN/} processed by ATAC-seq ENCODE4 v1.8.0 GRCh38 pipeline has 16900934 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. audit_warning: Alignment file {ENCFF818BRH|/files/ENCFF818BRH/} processed by ATAC-seq ENCODE4 v1.8.0 GRCh38 pipeline has 21404561 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| ATAC-seq_ENCSR382LBS | float |
ATAC-seq_ENCSR382LBS |
ATAC-seq ENCSR382LBS [biosample_summary="Homo sapiens NCI-H929"]
|
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[1.35, 33.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF060HHC.bed.gz | 6.24 MB | 3dd52fe23774b15d0fe60f4cf180ff55 |
| ENCFF060HHC.bed.gz.dvc | 101.0 B | 850c2eb1173e2ce1322e2846a39f7222 |
| ENCFF060HHC.tabix.bed.gz | 1.73 MB | 3905b0a1cf68399d99e52193b1bbf0bd |
| ENCFF060HHC.tabix.bed.gz.dvc | 107.0 B | 198605bc93812a1212098bee7103392e |
| ENCFF060HHC.tabix.bed.gz.tbi | 596.86 KB | 53e0b18c851f4e1d5ed424d3cce32060 |
| ENCFF060HHC.tabix.bed.gz.tbi.dvc | 110.0 B | c587c29bcd74833c1a39113dc06f6467 |
| genomic_resource.yaml | 2.06 KB | 81bf350af061deb8df84ccfa2863b379 |
| genomic_resource_original.yaml | 1.99 KB | 9b2b130301b6b720dc20b01a29c1389d |
| statistics/ |