Resource

Id ATAC-seq/ENCSR359HFHcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR359HFH [biosample_summary="Homo sapiens HG03095"]
Description
Labels
  • accession: ENCSR359HFH
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/cell_line_EFO_0010866/
  • biosample_summary: Homo sapiens HG03095
  • date_created: 2020-11-24T22:02:41.993567+00:00
  • date_released: 2021-02-11
  • doi: 10.17989/ENCSR359HFH
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR359HFH float

ATAC-seq_ENCSR359HFH
ATAC-seq ENCSR359HFH [biosample_summary="Homo sapiens HG03095"]
 HISTOGRAM FOR ATAC-seq_ENCSR359HFH [1.47, 42.3]
n
48,921,983
mean
6.93
sd
3.31

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 489219831.52% 93838
chr1 4300672 1.73% 8111
chr2 4309425 1.78% 8418
chr3 3484222 1.76% 6863
chr4 2743556 1.44% 5484
chr5 2983447 1.64% 5865
chr6 3299131 1.93% 6355
chr7 2806878 1.76% 5423
chr8 2427472 1.67% 4760
chr9 1916745 1.38% 3704
chr10 2362443 1.77% 4571
chr11 2364924 1.75% 4518
chr12 2426088 1.82% 4623
chr13 1362561 1.19% 2658
chr14 1504973 1.41% 2828
chr15 1344783 1.32% 2538
chr16 1385695 1.53% 2506
chr17 1612516 1.94% 2918
chr18 1135092 1.41% 2256
chr19 1304610 2.23% 2185
chr20 1034109 1.60% 1997
chr21 508398 1.09% 933
chr22 616741 1.21% 1079
chrX 1686788 1.08% 3243
chrY 714 <0.01% 2
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 93838 150 2830 521.35 434
global segment-length histogram

Files

Filename Size md5
ENCFF099GAL.bed.gz 3.59 MB bdc562271750e3389dc4d4fc86fa8bfc
ENCFF099GAL.tabix.bed.gz 1.03 MB ef903ec669395308fa1d36fd54a03052
ENCFF099GAL.tabix.bed.gz.tbi 419.54 KB f58e4c29959117c1febfa98d590c5fbf
genomic_resource.yaml 1.82 KB d6ff7975d1ee3c394ca3d81470e45fbe
statistics/