Resource

Id ATAC-seq/ENCSR214EIVcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR214EIV [biosample_summary="Homo sapiens GM21619"]
Description
Labels
  • accession: ENCSR214EIV
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/cell_line_CLO_0013950/
  • biosample_summary: Homo sapiens GM21619
  • date_created: 2020-11-24T22:02:40.787810+00:00
  • date_released: 2021-02-11
  • doi: 10.17989/ENCSR214EIV
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary:
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR214EIV float

ATAC-seq_ENCSR214EIV
ATAC-seq ENCSR214EIV [biosample_summary="Homo sapiens GM21619"]
 HISTOGRAM FOR ATAC-seq_ENCSR214EIV [1.5, 34.1]
n
58,385,370
mean
7.28
sd
3.67

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 583853701.81% 110520
chr1 5328372 2.14% 9983
chr2 5117302 2.11% 9937
chr3 4174245 2.11% 8158
chr4 3383759 1.78% 6744
chr5 3605009 1.99% 7029
chr6 3947607 2.31% 7555
chr7 3243705 2.04% 6225
chr8 2899306 2.00% 5668
chr9 2313190 1.67% 4371
chr10 2830653 2.12% 5408
chr11 2803699 2.08% 5270
chr12 2871554 2.15% 5432
chr13 1597419 1.40% 3100
chr14 1789552 1.67% 3298
chr15 1671778 1.64% 3094
chr16 1635949 1.81% 2819
chr17 1978237 2.38% 3398
chr18 1302050 1.62% 2587
chr19 1509507 2.58% 2330
chr20 1234882 1.92% 2307
chr21 536341 1.15% 968
chr22 734353 1.45% 1216
chrX 1745100 1.12% 3340
chrY 131801 0.23% 283
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 110520 150 2897 528.28 438
global segment-length histogram

Files

Filename Size md5
ENCFF715UOV.bed.gz 4.15 MB 598ae2b7a475adda35f490a433c91f59
ENCFF715UOV.tabix.bed.gz 1.21 MB 6fb6177d431f330db6ea0ceabde0baec
ENCFF715UOV.tabix.bed.gz.tbi 466.41 KB 94b2bd6641d521e9b167e2094931e5e9
genomic_resource.yaml 1.28 KB d4fe18d004fb88416cb36a455775f266
statistics/