Resource

Id ATAC-seq/ENCSR213YPOcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR213YPO [biosample_summary="Homo sapiens right cardiac atrium tissue male adult (60 years)"]
Description
Labels
  • accession: ENCSR213YPO
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002078/
  • biosample_summary: Homo sapiens right cardiac atrium tissue male adult (60 years)
  • date_created: 2019-06-02T10:18:29.937041+00:00
  • date_released: 2020-10-08
  • doi: 10.17989/ENCSR213YPO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR213YPO float

ATAC-seq_ENCSR213YPO
ATAC-seq ENCSR213YPO [biosample_summary="Homo sapiens right cardiac atrium tissue male adult (60 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR213YPO [1.31, 35.3]
n
82,647,303
mean
4.55
sd
2.4

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 826473032.57% 147501
chr1 7905124 3.18% 13875
chr2 6577655 2.72% 12048
chr3 5215720 2.63% 9726
chr4 3487816 1.83% 6634
chr5 4415709 2.43% 8255
chr6 4556645 2.67% 8443
chr7 4297762 2.70% 7801
chr8 3623036 2.50% 6734
chr9 3689084 2.67% 6470
chr10 4228950 3.16% 7716
chr11 4274203 3.16% 7422
chr12 3893781 2.92% 6989
chr13 2051196 1.79% 3902
chr14 2546348 2.38% 4454
chr15 3015053 2.96% 5329
chr16 2992900 3.31% 4984
chr17 3937992 4.73% 6428
chr18 1825959 2.27% 3518
chr19 3157507 5.39% 4718
chr20 2333958 3.62% 4096
chr21 1146261 2.45% 2002
chr22 1892458 3.72% 3175
chrX 1515437 0.97% 2642
chrY 66749 0.12% 140
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 147501 150 3737 560.32 451
global segment-length histogram

Files

Filename Size md5
ENCFF442AAP.bed.gz 5.35 MB 45c9246177b93918ba383659bc42cd87
ENCFF442AAP.tabix.bed.gz 1.6 MB 1d3acc3657883c6464bac5788a03f5d2
ENCFF442AAP.tabix.bed.gz.tbi 498.09 KB 8466b28a4b6a1c0b9adf5b058ee649dd
genomic_resource.yaml 2.16 KB 7b93dde65a684dcccef54a440b375c4b
statistics/