Resource

Id ATAC-seq/ENCSR212LYKcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR212LYK [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)"]
Description
Labels
  • accession: ENCSR212LYK
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue female adult (46 years)
  • date_created: 2019-05-29T11:29:45.104527+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR212LYK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (46 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR212LYK float

ATAC-seq_ENCSR212LYK
ATAC-seq ENCSR212LYK [biosample_summary="Homo sapiens heart right ventricle tissue female adult (46 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR212LYK [1.29, 47.1]
n
93,904,913
mean
7.34
sd
5.13

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 939049132.92% 190551
chr1 9029674 3.63% 18113
chr2 7562589 3.12% 15800
chr3 5854483 2.95% 12538
chr4 3724853 1.96% 8180
chr5 4924504 2.71% 10503
chr6 5126434 3.00% 10971
chr7 4838623 3.04% 9913
chr8 4109977 2.83% 8751
chr9 4130130 2.98% 8207
chr10 4866760 3.64% 9976
chr11 4834392 3.58% 9513
chr12 4268995 3.20% 8736
chr13 2264783 1.98% 4902
chr14 2852455 2.66% 5750
chr15 3363918 3.30% 6843
chr16 3509995 3.89% 6574
chr17 4463776 5.36% 8164
chr18 2091313 2.60% 4554
chr19 3626428 6.19% 6025
chr20 2713136 4.21% 5342
chr21 1248197 2.67% 2477
chr22 2256428 4.44% 4167
chrX 2241028 1.44% 4543
chrY 2042 <0.01% 9
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 190551 150 3592 492.81 393
global segment-length histogram

Files

Filename Size md5
ENCFF826UKK.bed.gz 5.91 MB ec3eb356a419b2b553e531ae1849e3ab
ENCFF826UKK.tabix.bed.gz 2.03 MB 984ac3975acc0d565942d1a543a3494c
ENCFF826UKK.tabix.bed.gz.tbi 552.63 KB 5e199094d82fbc1e865863248c434c8f
genomic_resource.yaml 1.66 KB 58d3e2a01b5ec949eaa1ad810651fc8a
statistics/