Resource

Id ATAC-seq/ENCSR212LAZcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR212LAZ [biosample_summary="Homo sapiens fallopian tube tissue female adult (59 years)"]
Description
Labels
  • accession: ENCSR212LAZ
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0003889/
  • biosample_summary: Homo sapiens fallopian tube tissue female adult (59 years)
  • date_created: 2019-06-02T03:35:05.070794+00:00
  • date_released: 2020-08-17
  • doi: 10.17989/ENCSR212LAZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (59 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR212LAZ float

ATAC-seq_ENCSR212LAZ
ATAC-seq ENCSR212LAZ [biosample_summary="Homo sapiens fallopian tube tissue female adult (59 years)"]
 HISTOGRAM FOR ATAC-seq_ENCSR212LAZ [1.34, 37.9]
n
98,505,717
mean
5.44
sd
2.88

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 985057173.06% 166926
chr1 9261378 3.72% 15424
chr2 7820734 3.23% 13500
chr3 6295060 3.17% 10895
chr4 4469670 2.35% 8023
chr5 5139176 2.83% 9010
chr6 5624056 3.29% 9731
chr7 4959439 3.11% 8456
chr8 4417052 3.04% 7635
chr9 4388056 3.17% 7452
chr10 4889540 3.65% 8341
chr11 5195189 3.85% 8601
chr12 4649240 3.49% 7850
chr13 2501081 2.19% 4418
chr14 3188929 2.98% 5424
chr15 3382194 3.32% 5683
chr16 3291792 3.64% 5335
chr17 4501716 5.41% 7152
chr18 2273775 2.83% 4004
chr19 3227476 5.51% 4804
chr20 2815102 4.37% 4787
chr21 1435301 3.07% 2416
chr22 2120820 4.17% 3429
chrX 2656077 1.70% 4544
chrY 2864 0.01% 12
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 166926 150 3279 590.12 483
global segment-length histogram

Files

Filename Size md5
ENCFF164WOV.bed.gz 6.22 MB 5ddf1912631c24949b66268db593a02e
ENCFF164WOV.tabix.bed.gz 1.82 MB bacd633ecafd0941702554b5bb9a96ff
ENCFF164WOV.tabix.bed.gz.tbi 543.11 KB 55d0ae8a31b8f0b61a1e8a7dff8b2434
genomic_resource.yaml 1.64 KB 047607b8d2d84ac37b5ffd478d061239
statistics/