Resource

Id ATAC-seq/ENCSR113MBRcontent_copy
Type position_score
Version 0
Summary ATAC-seq ENCSR113MBR [biosample_summary="Homo sapiens adrenal gland tissue male adult (54 years)"]
Description
Labels
  • accession: ENCSR113MBR
  • assay_term_name: ATAC-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002369/
  • biosample_summary: Homo sapiens adrenal gland tissue male adult (54 years)
  • date_created: 2016-11-01T02:55:12.838655+00:00
  • date_released: 2016-10-31
  • doi: 10.17989/ENCSR113MBR
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (54 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
ATAC-seq_ENCSR113MBR float

ATAC-seq_ENCSR113MBR

ATAC-seq ENCSR113MBR [biosample_summary="Homo sapiens adrenal gland tissue male adult (54 years)"]
HISTOGRAM FOR ATAC-seq_ENCSR113MBR [1.37, 36.7]
n
70,652,232
mean
5.72
sd
2.78

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 706522322.20% 135892
chr1 6795713 2.73% 12930
chr2 5617950 2.32% 11028
chr3 4431903 2.23% 8754
chr4 3047274 1.60% 6156
chr5 3815923 2.10% 7590
chr6 3836913 2.25% 7383
chr7 3707741 2.33% 7244
chr8 3181230 2.19% 6257
chr9 3177833 2.30% 6081
chr10 3556654 2.66% 6857
chr11 3780369 2.80% 7185
chr12 3460016 2.60% 6642
chr13 1693872 1.48% 3362
chr14 2259514 2.11% 4339
chr15 2281283 2.24% 4388
chr16 2556378 2.83% 4701
chr17 3272805 3.93% 5947
chr18 1565063 1.95% 3157
chr19 2572142 4.39% 4379
chr20 2007680 3.12% 3914
chr21 894033 1.91% 1695
chr22 1507884 2.97% 2832
chrX 1547917 0.99% 2883
chrY 84142 0.15% 188
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 135892 150 3261 519.91 419
global segment-length histogram

Files

Filename Size md5
ENCFF010JOP.bed.gz 5.08 MB 8219f94acaee91bc943b09578f87b7cd
ENCFF010JOP.tabix.bed.gz 1.47 MB 3eac7c43706299aec3683be4789b0ece
ENCFF010JOP.tabix.bed.gz.tbi 499.21 KB dadd1a61b12e819275e3ea70a801e2b8
genomic_resource.yaml 1.62 KB 8e9c8a055cbd97cb7b8942fbfb489fe9
statistics/