type: position_score
table:
  filename: ENCFF570EVR.tabix.bed.gz
  header_mode: none
  zero_based: true
  format: tabix
  chrom:
    column_index: 0
  pos_begin:
    column_index: 1
  pos_end:
    column_index: 2
scores:
- id: ATAC-seq_ENCSR092SRS
  column_index: 3
  type: float
  desc: signal
  histogram:
    type: number
    number_of_bins: 100
meta:
  summary: 'ATAC-seq ENCSR092SRS [TISSUE: Homo sapiens activated T-cell male adult
    (42 years) treated with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28
    coated beads for 4 hours]'
  description: '**status**: released


    **biological\_replicates**: Rep 1


    **summary**: male adult (42 years) treated with 50 U/mL Interleukin-2 for 4 hours,
    anti-CD3 and anti-CD28 coated beads for 4 hours


    **output\_type**: pseudoreplicated peaks


    **audit\_internal\_action**: Released analysis {ENCAN613BWB|/analyses/ENCAN613BWB/}
    has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/}


    **audit\_warning**: Alignment file {ENCFF240AMX|/files/ENCFF240AMX/} processed
    by ATAC-seq ENCODE4 v1.10.0 GRCh38 pipeline has 24783870 usable fragments. According
    to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline
    should have > 25 million usable fragments. 20-25 million is acceptable and < 15
    million is not compliant.'
  labels:
    reference_genome: hg38/genomes/GRCh38-hg38
    accession: ENCSR092SRS
    status: released
    assay_term_name: ATAC-seq
    simple_biosample_summary: male adult (42 years) treated with 50 U/mL Interleukin-2
      for 4 hours, anti-CD3 and anti-CD28 coated beads for 4 hours
    biosample_summary: Homo sapiens activated T-cell male adult (42 years) treated
      with 50 U/mL Interleukin-2 for 4 hours, anti-CD3 and anti-CD28 coated beads
      for 4 hours
    replication_type: unreplicated
    biosample_ontology: /biosample-types/primary_cell_NTR_0000537/
    perturbed: false
    doi: 10.17989/ENCSR092SRS
    date_created: '2021-01-22T21:00:20.280879+00:00'
    date_released: '2021-06-24'
    submitter_comment: ''
