| Id: | ATAC-seq/ENCSR080SNF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
ATAC-seq ENCSR080SNF [biosample_summary="Homo sapiens RWPE2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2, Rep 3 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN367YCE|/analyses/ENCAN367YCE/} has in progress subobject quality standard {encode4-atac-seq|/quality-standards/encode4-atac-seq/} audit_warning: Alignment file {ENCFF417FFE|/files/ENCFF417FFE/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has 24028837 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. audit_warning: Alignment file {ENCFF452BSA|/files/ENCFF452BSA/} processed by ATAC-seq ENCODE4 v1.9.1 GRCh38 pipeline has 21471668 usable fragments. According to ENCODE4 standards, ATAC-seq assays processed by the uniform processing pipeline should have > 25 million usable fragments. 20-25 million is acceptable and < 15 million is not compliant. |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| ATAC-seq_ENCSR080SNF | float |
ATAC-seq_ENCSR080SNF |
ATAC-seq ENCSR080SNF [biosample_summary="Homo sapiens RWPE2"]
|
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[1.37, 43.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF729MMJ.bed.gz | 5.96 MB | 8bf74b779aa4907d1fed76eba8350cef |
| ENCFF729MMJ.bed.gz.dvc | 101.0 B | d6ed187d45d21f15f51e2e5088abf378 |
| ENCFF729MMJ.tabix.bed.gz | 1.8 MB | dc163d90df703323e140ea61ff785d97 |
| ENCFF729MMJ.tabix.bed.gz.dvc | 107.0 B | e1209fffa5408d79e5680db241b9ff43 |
| ENCFF729MMJ.tabix.bed.gz.tbi | 595.21 KB | b7c543831bab3dbd0df3e64d06c4f8b7 |
| ENCFF729MMJ.tabix.bed.gz.tbi.dvc | 110.0 B | 40a5f2867ddb81c95c1a014fd52db0ae |
| genomic_resource.yaml | 2.04 KB | 441695a5bd81a0c663fb4c7e2ec7b116 |
| genomic_resource_original.yaml | 1.97 KB | e17eeb3e1afa26b9ffd421ebb1e298ec |
| statistics/ |